STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUSD4Sushi domain containing 4. (486 aa)    
Predicted Functional Partners:
ZNF407
Zinc finger protein 407.
      
 0.800
FHAD1
Forkhead associated phosphopeptide binding domain 1.
      
 0.795
SEL1L3
SEL1L family member 3.
      
 0.741
CDK17
Cyclin dependent kinase 17.
   
  
 0.740
PGLYRP2
Peptidoglycan recognition protein 2.
      
 0.739
BCAS3
BCAS3 microtubule associated cell migration factor.
      
 0.699
MGAT4C
MGAT4 family member C.
      
 0.625
ENSSSUP00005000533
annotation not available
      
 0.538
ENSSSUP00005014179
annotation not available
      
 0.538
MALRD1
MAM and LDL receptor class A domain containing 1.
      
 0.537
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.