STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSUP00005005040annotation not available (1153 aa)    
Predicted Functional Partners:
ENSSSUP00005008932
annotation not available
   
 0.992
ENSSSUP00005001741
annotation not available
    
 
0.916
RAC1
Rac family small GTPase 1.
    
 0.888
RAC3
Rac family small GTPase 3.
    
 0.850
CDHR5
Cadherin related family member 5.
      
 0.800
KHDRBS2
KH RNA binding domain containing, signal transduction associated 2.
   
  
 0.797
MAPRE3
Microtubule associated protein RP/EB family member 3.
      
 0.781
LGSN
Lengsin, lens protein with glutamine synthetase domain.
   
  
 0.744
RFXAP
Regulatory factor X associated protein.
      
 0.742
MGST3
Microsomal glutathione S-transferase 3.
    
 
 0.679
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.