STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UROSUroporphyrinogen III synthase. (373 aa)    
Predicted Functional Partners:
HMBS
Hydroxymethylbilane synthase.
  
 0.997
ALAD
Aminolevulinate dehydratase.
  
 0.996
UROD
Uroporphyrinogen decarboxylase.
  
 
 0.983
ENDOV
Endonuclease V.
  
 
 0.888
PPOX
Protoporphyrinogen oxidase.
  
 
 0.882
CPOX
Coproporphyrinogen oxidase.
     
 0.805
FECH
Ferrochelatase.
  
  
 0.801
ENSSSUP00005004244
annotation not available
      
 0.740
IYD
Iodotyrosine deiodinase.
  
 
 0.720
GART
annotation not available
  
    0.553
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.