STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSUP00005006400annotation not available (171 aa)    
Predicted Functional Partners:
AIFM1
Apoptosis inducing factor mitochondria associated 1.
    
 0.732
ENSSSUP00005033608
annotation not available
   
 
  0.685
H2AX
H2A.X variant histone.
     
 0.659
ENSSSUP00005028384
annotation not available
   
    0.641
PRPF8
pre-mRNA processing factor 8.
   
  0.641
ENSSSUP00005002781
annotation not available
   
 
  0.636
RPS9
Ribosomal protein S9.
  
 0.636
PRPF19
pre-mRNA processing factor 19.
    
 0.629
MRPL3
Mitochondrial ribosomal protein L3.
   
  0.623
XAB2
XPA binding protein 2.
    
 0.623
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.