STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL8A2Collagen type VIII alpha 2 chain. (703 aa)    
Predicted Functional Partners:
COL8A1
Collagen type VIII alpha 1 chain.
  
0.950
CYYR1
Cysteine and tyrosine rich 1.
      
 0.767
KANK4
KN motif and ankyrin repeat domains 4.
    
 0.764
COL14A1
Collagen type XIV alpha 1 chain.
  
 
0.736
ENSSSUP00005014647
annotation not available
    
 0.639
SLC4A11
Solute carrier family 4 member 11.
      
 0.632
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.622
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.618
LOXHD1
Lipoxygenase homology domains 1.
    
 0.607
SERPINH1
Serpin family H member 1.
    
 0.604
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.