STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPAP2RNA polymerase II associated protein 2. (610 aa)    
Predicted Functional Partners:
RPRD2
Regulation of nuclear pre-mRNA domain containing 2.
   
 0.989
RPRD1B
Regulation of nuclear pre-mRNA domain containing 1B.
   
 0.976
POLR2C
RNA polymerase II subunit C.
    
 0.971
POLR2G
RNA polymerase II subunit G.
    
 0.969
POLR2D
RNA polymerase II subunit D.
    
 0.966
ENSSSUP00005025374
annotation not available
    
 0.965
POLR2B
RNA polymerase II subunit B.
    
 0.962
ENSSSUP00005029297
annotation not available
    
 0.962
POLR2E
RNA polymerase II subunit E.
    
 0.960
GPN3
GPN-loop GTPase 3.
    
 
 0.958
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
Server load: low (24%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.