STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LETM2Leucine zipper and EF-hand containing transmembrane protein 2. (491 aa)    
Predicted Functional Partners:
FAM118A
Family with sequence similarity 118 member A.
    
 
 0.797
RHBDD3
Rhomboid domain containing 3.
      
 0.796
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
   
 
 0.785
RAB11FIP1
RAB11 family interacting protein 1.
    
 
 0.744
REEP6
Receptor accessory protein 6.
      
 0.741
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
      
 0.739
RPS18
Ribosomal protein S18.
    
   0.641
ENSSSUP00005020203
annotation not available
    
   0.641
RPS9
Ribosomal protein S9.
    
   0.641
GPAT2
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
      
 0.638
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.