STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOCKClock circadian regulator. (843 aa)    
Predicted Functional Partners:
CRY1
Cryptochrome circadian regulator 1.
    
 0.993
CRY2
Cryptochrome circadian regulator 2.
    
 0.990
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
   
0.983
ENSSSUP00005008020
annotation not available
    
 0.941
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
0.939
PER2
Period circadian regulator 2.
    
0.932
PER1
Period circadian regulator 1.
    
0.932
CSNK1D
Casein kinase 1 delta.
    
 0.871
ENSSSUP00005024333
annotation not available
    
 0.868
NPAS4
Neuronal PAS domain protein 4.
    
0.816
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.