STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLX4IPSLX4 interacting protein. (406 aa)    
Predicted Functional Partners:
RAD54L2
RAD54 like 2.
      
 0.798
SLX4
SLX4 structure-specific endonuclease subunit.
    
 
 0.749
PCED1A
PC-esterase domain containing 1A.
      
 0.612
ENSSSUP00005035013
annotation not available
    
 
 0.559
SLF1
SMC5-SMC6 complex localization factor 1.
      
 0.537
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
      
 0.522
PAK5
P21 (RAC1) activated kinase 5.
      
 0.521
SMARCAL1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1.
   
  
 0.521
SNX5
Sorting nexin 5.
      
 0.521
RHNO1
RAD9-HUS1-RAD1 interacting nuclear orphan 1.
      
 0.513
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.