STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDGFRAPlatelet derived growth factor receptor alpha. (1089 aa)    
Predicted Functional Partners:
PDGFA
Platelet derived growth factor subunit A.
    
 0.998
PDGFB
Platelet derived growth factor subunit B.
   
 0.994
PDGFC
Platelet derived growth factor C.
    
 0.990
PIK3R1
Phosphoinositide-3-kinase regulatory subunit 1.
    
 0.978
PDGFD
Platelet derived growth factor D.
    
 0.977
PDGFRB
Platelet derived growth factor receptor beta.
   
0.970
FGF2
Fibroblast growth factor 2.
    
 0.966
EGFR
Epidermal growth factor receptor.
   
0.961
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
 0.960
VEGFA
Vascular endothelial growth factor A.
    
 0.956
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.