STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGD6FYVE, RhoGEF and PH domain containing 6. (1422 aa)    
Predicted Functional Partners:
GGT5
Gamma-glutamyltransferase 5.
      
 0.645
ENSSSUP00005009294
annotation not available
     
 0.639
MOCOS
Molybdenum cofactor sulfurase.
      
 0.629
ARHGEF16
Rho guanine nucleotide exchange factor 16.
   
  
 0.620
POC1B
POC1 centriolar protein B.
      
 0.617
UPK3A
Uroplakin 3A.
      
 0.617
LYRM7
LYR motif containing 7.
      
 0.616
GIT1
GIT ArfGAP 1.
      
 0.616
ENSSSUP00005000332
annotation not available
      
 0.608
ENSSSUP00005000533
annotation not available
      
 0.585
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.