STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN1Tetraspanin 1. (260 aa)    
Predicted Functional Partners:
CDHR2
Cadherin related family member 2.
     
 0.623
METTL7B
Methyltransferase like 7B.
    
 
 0.545
TSPAN13
Tetraspanin 13.
   
  
 0.541
TSC22D2
TSC22 domain family member 2.
      
 0.534
RBM26
RNA binding motif protein 26.
      
 0.529
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
      
 0.525
GKN2
Gastrokine 2.
      
 0.512
TSPAN31
Tetraspanin 31.
      
 0.475
GLIPR2
GLI pathogenesis related 2.
      
 0.472
MLF1
Myeloid leukemia factor 1.
      
 0.463
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.