STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXJ3Forkhead box J3. (604 aa)    
Predicted Functional Partners:
SOX6
SRY-box transcription factor 6.
    
 
 0.745
ENSSSUP00005018310
annotation not available
     
 0.730
PRKCI
Protein kinase C iota.
    
 0.671
DICER1
Dicer 1, ribonuclease III.
   
 0.614
MED22
Mediator complex subunit 22.
     
 0.548
PARD3
Par-3 family cell polarity regulator.
      
 0.534
EGR3
Early growth response 3.
    
 0.517
ZNF605
Zinc finger protein 605.
    
 0.510
TRIB1
Tribbles pseudokinase 1.
    
 0.508
ENSSSUP00005034822
annotation not available
      
 0.505
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.