STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUGP1SURP and G-patch domain containing 1. (636 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
    
 0.992
U2AF2
U2 small nuclear RNA auxiliary factor 2.
    
 
 0.966
RBM10
RNA binding motif protein 10.
   
0.957
ENSSSUP00005000837
annotation not available
   
 
 0.948
RBM17
RNA binding motif protein 17.
   
 
 0.948
SF1
Splicing factor 1.
   
 0.928
SRRM2
Serine/arginine repetitive matrix 2.
   
 
 0.927
RBM25
RNA binding motif protein 25.
   
 
 0.922
DHX9
DExH-box helicase 9.
    
  0.914
RBM39
RNA binding motif protein 39.
   
  0.909
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.