STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNDC3BFibronectin type III domain containing 3B. (1207 aa)    
Predicted Functional Partners:
FBLN7
Fibulin 7.
    
 0.633
HSPA12A
Heat shock protein family A (Hsp70) member 12A.
      
 0.626
FIGN
Fidgetin, microtubule severing factor.
    
 
 0.624
DENND5B
DENN domain containing 5B.
   
  
 0.615
LGI3
Leucine rich repeat LGI family member 3.
    
 0.604
SND1
Staphylococcal nuclease and tudor domain containing 1.
      
 0.551
NCEH1
Neutral cholesterol ester hydrolase 1.
      
 0.545
FGD4
FYVE, RhoGEF and PH domain containing 4.
      
 0.528
NCKAP1L
NCK associated protein 1 like.
     
 0.527
RTL1
Retrotransposon Gag like 1.
      
 0.522
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.