STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIA4Glutamate ionotropic receptor AMPA type subunit 4. (884 aa)    
Predicted Functional Partners:
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
  
0.985
CACNG8
Calcium voltage-gated channel auxiliary subunit gamma 8.
    
 0.957
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
  
 
0.934
CACNG2
Calcium voltage-gated channel auxiliary subunit gamma 2.
   
 0.934
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
  
0.928
CACNG3
Calcium voltage-gated channel auxiliary subunit gamma 3.
   
 0.928
KIF5C
Kinesin family member 5C.
   
 0.918
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
    
 0.918
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha.
    
 0.918
KIF5A
Kinesin family member 5A.
   
 0.917
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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