STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGNL1Cingulin like 1. (1296 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1.
    
 0.953
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
     
 0.914
TRAPPC1
Trafficking protein particle complex 1.
    
 0.834
TRAPPC4
Trafficking protein particle complex 4.
    
 0.834
TRAPPC5
Trafficking protein particle complex 5.
    
 0.828
TRAPPC8
Trafficking protein particle complex 8.
    
 0.812
GDI1
GDP dissociation inhibitor 1.
    
 0.747
GDI2
GDP dissociation inhibitor 2.
    
 0.747
MARVELD2
MARVEL domain containing 2.
      
 0.742
RABIF
RAB interacting factor.
    
 
 0.693
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.