STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSUP00005012298annotation not available (465 aa)    
Predicted Functional Partners:
POLR2M
RNA polymerase II subunit M.
 
   
 0.853
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.536
ARID4B
AT-rich interaction domain 4B.
    
 0.514
ARID4A
AT-rich interaction domain 4A.
    
 0.514
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.421
ENSSSUP00005025374
annotation not available
   
  0.414
POLR2G
RNA polymerase II subunit G.
    
  0.413
POLR2B
RNA polymerase II subunit B.
    
  0.409
ENSSSUP00005029297
annotation not available
    
  0.403
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.