STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATF7IPActivating transcription factor 7 interacting protein. (1266 aa)    
Predicted Functional Partners:
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
   
 0.996
ARL14EP
ADP ribosylation factor like GTPase 14 effector protein.
  
 
 
 0.993
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
   
 0.941
C1QC
Complement C1q C chain.
    
 0.694
PHF7
PHD finger protein 7.
   
 0.694
CLPTM1L
CLPTM1 like.
      
 0.685
CEP78
Centrosomal protein 78.
      
 0.621
HTT
Huntingtin.
      
 0.616
ZMYM4
Zinc finger MYM-type containing 4.
   
 0.600
SP1
Sp1 transcription factor.
   
 0.600
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.