STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX1Paired box 1. (440 aa)    
Predicted Functional Partners:
FOXN1
Forkhead box N1.
      
 0.715
GCM2
Glial cells missing transcription factor 2.
      
 0.674
TCF15
Transcription factor 15.
      
 0.621
FOXF1
Forkhead box F1.
   
  
 0.538
LMO2
LIM domain only 2.
      
 0.537
CA12
Carbonic anhydrase 12.
      
 0.531
MEOX2
Mesenchyme homeobox 2.
    
 
 0.510
MEOX1
Mesenchyme homeobox 1.
    
 
 0.502
SP1
Sp1 transcription factor.
      
 0.474
LDB1
LIM domain binding 1.
      
 0.471
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.