STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRVI1Murine retrovirus integration site 1 homolog. (910 aa)    
Predicted Functional Partners:
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.970
PRKG1
Protein kinase cGMP-dependent 1.
   
 0.954
PRKG2
Protein kinase cGMP-dependent 2.
   
 0.938
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.887
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.887
LRRC3B
Leucine rich repeat containing 3B.
    
 
 0.802
STOX1
Storkhead box 1.
      
 0.736
ASB5
Ankyrin repeat and SOCS box containing 5.
    
 0.670
TMC6
Transmembrane channel like 6.
    
 0.651
EFHB
EF-hand domain family member B.
      
 0.618
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.