STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSUP00005013389annotation not available (213 aa)    
Predicted Functional Partners:
OCIAD1
OCIA domain containing 1.
      
 0.616
ZNF22
Zinc finger protein 22.
      
 0.615
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
      
 0.613
ENSSSUP00005002681
annotation not available
      
 0.612
ENSSSUP00005023493
annotation not available
      
 0.601
MTERF4
Mitochondrial transcription termination factor 4.
      
 0.592
NSUN4
NOP2/Sun RNA methyltransferase 4.
      
 0.590
SLIRP
SRA stem-loop interacting RNA binding protein.
   
  
 0.540
RDH13
Retinol dehydrogenase 13.
      
 0.536
TMEM223
Transmembrane protein 223.
   
  
 0.533
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.