STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LXNLatexin. (222 aa)    
Predicted Functional Partners:
CPA4
Carboxypeptidase A4.
    
 
 0.863
CPA1
Carboxypeptidase A1.
    
 
 0.812
NTNG2
Netrin G2.
      
 0.801
TM7SF3
Transmembrane 7 superfamily member 3.
      
 0.788
NPSR1
Neuropeptide S receptor 1.
      
 0.708
CPA5
Carboxypeptidase A5.
    
 
 0.686
AGBL2
ATP/GTP binding protein like 2.
    
 
 0.674
PCP4
Purkinje cell protein 4.
      
 0.538
OPRK1
Opioid receptor kappa 1.
      
 0.532
ENSSSUP00005027392
annotation not available
      
 0.528
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.