STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX27Sorting nexin 27. (548 aa)    
Predicted Functional Partners:
VPS26A
VPS26, retromer complex component A.
   
 0.994
SNX3
Sorting nexin 3.
    
 0.993
VPS26B
VPS26, retromer complex component B.
   
 0.989
SNX2
Sorting nexin 2.
    
 0.980
VPS35
VPS35 retromer complex component.
    
 0.977
SNX5
Sorting nexin 5.
    
 0.963
SNX1
Sorting nexin 1.
    
 0.945
OTULIN
OTU deubiquitinase with linear linkage specificity.
    
 
 0.944
ENTR1
Endosome associated trafficking regulator 1.
    
 0.940
WASHC1
WASH complex subunit 1.
    
 0.936
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.