STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRDProtein tyrosine phosphatase receptor type D. (1912 aa)    
Predicted Functional Partners:
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
    
0.999
IL1RAP
Interleukin 1 receptor accessory protein.
    
 0.991
IL1RAPL1
Interleukin 1 receptor accessory protein like 1.
    
 0.979
SLITRK2
SLIT and NTRK like family member 2.
    
 0.974
PPFIA3
PTPRF interacting protein alpha 3.
    
 0.916
NTRK3
Neurotrophic receptor tyrosine kinase 3.
    
 0.895
LRFN1
Leucine rich repeat and fibronectin type III domain containing 1.
    
 0.891
NLGN3
Neuroligin 3.
    
 
 0.865
SLITRK3
SLIT and NTRK like family member 3.
    
 0.851
NTRK2
Neurotrophic receptor tyrosine kinase 2.
    
 0.783
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.