STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UTP4UTP4 small subunit processome component. (776 aa)    
Predicted Functional Partners:
BYSL
Bystin like.
   
 0.999
ENSSSUP00005003184
annotation not available
   
 0.999
PDCD11
Programmed cell death 11.
   
 0.999
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
  0.999
BMS1
BMS1 ribosome biogenesis factor.
   
 0.999
WDR43
WD repeat domain 43.
   
 0.999
WDR36
WD repeat domain 36.
   
 0.999
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.999
HEATR1
HEAT repeat containing 1.
   
 0.999
UTP15
UTP15 small subunit processome component.
   
 0.999
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.