STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4FSsemaphorin 4F. (770 aa)    
Predicted Functional Partners:
PLXNB3
Plexin B3.
    
 0.949
PLXNB2
Plexin B2.
    
 0.925
MST1R
Macrophage stimulating 1 receptor.
  
 
 0.745
SEMA4G
Semaphorin 4G.
     
0.733
ENSSSUP00005036286
annotation not available
    
 0.669
PLXND1
Plexin D1.
    
 0.603
RND3
Rho family GTPase 3.
    
 0.591
NRP1
Neuropilin 1.
    
 0.558
RNF135
Ring finger protein 135.
      
 0.534
PCGF1
Polycomb group ring finger 1.
      
 0.532
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.