STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP3Ubiquitin specific peptidase 3. (535 aa)    
Predicted Functional Partners:
SGF29
SAGA complex associated factor 29.
   
 0.901
TRRAP
Transformation/transcription domain associated protein.
    
 0.895
TEP1
Telomerase associated protein 1.
    
 0.894
TAF10
TATA-box binding protein associated factor 10.
    
 0.890
TADA2A
Transcriptional adaptor 2A.
    
 0.889
ENSSSUP00005003622
annotation not available
    
 0.879
TAF12
TATA-box binding protein associated factor 12.
    
 0.865
TAF9B
TATA-box binding protein associated factor 9b.
    
 0.864
TADA1
Transcriptional adaptor 1.
    
  0.812
ENSSSUP00005029520
annotation not available
    
 0.812
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.