STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGBL2ATP/GTP binding protein like 2. (800 aa)    
Predicted Functional Partners:
TMEM192
Transmembrane protein 192.
      
 0.751
LXN
Latexin.
    
 
 0.674
CPQ
Carboxypeptidase Q.
      
 0.633
ENSSSUP00005005941
annotation not available
      
 0.523
TTL
Tubulin tyrosine ligase.
      
 0.472
ENSSSUP00005000776
annotation not available
      
 0.414
SPOCK2
SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2.
      
 0.403
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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