STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSUP00005020141annotation not available (194 aa)    
Predicted Functional Partners:
ENSSSUP00005027400
annotation not available
     
 0.663
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
    
 0.654
ENSSSUP00005021201
annotation not available
    
 0.654
ENSSSUP00005031037
annotation not available
    
 0.654
ZAN
Zonadhesin (gene/pseudogene).
      
 0.619
ATG12
Autophagy related 12.
     
 0.577
ULK1
Unc-51 like autophagy activating kinase 1.
    
 0.561
ULK2
Unc-51 like autophagy activating kinase 2.
    
 0.561
ATG5
Autophagy related 5.
     
 0.556
DSTN
Destrin, actin depolymerizing factor.
      
 0.526
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.