STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL54Mitochondrial ribosomal protein L54. (138 aa)    
Predicted Functional Partners:
ENSSSUP00005013597
annotation not available
   
 
 0.972
MRPL17
Mitochondrial ribosomal protein L17.
   
 
 0.966
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.962
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.952
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.951
ENSSSUP00005036703
annotation not available
   
 
 0.948
MRPL43
Mitochondrial ribosomal protein L43.
   
 
 0.946
MRPS25
Mitochondrial ribosomal protein S25.
   
 
 0.944
MRPL14
Mitochondrial ribosomal protein L14.
   
   0.941
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.941
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.