STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPH3ALRabphilin 3A like (without C2 domains). (283 aa)    
Predicted Functional Partners:
DOC2B
Double C2 domain beta.
 
    
 0.949
CCDC83
Coiled-coil domain containing 83.
      
 0.829
MPHOSPH6
M-phase phosphoprotein 6.
      
 0.792
IGF2BP1
Insulin like growth factor 2 mRNA binding protein 1.
      
 0.764
SYT10
Synaptotagmin 10.
 
 
 
 0.745
SPAG9
Sperm associated antigen 9.
      
 0.745
AFAP1L1
Actin filament associated protein 1 like 1.
      
 0.742
VPS53
VPS53 subunit of GARP complex.
      
 0.742
INPP5K
Inositol polyphosphate-5-phosphatase K.
      
 0.741
ENSSSUP00005009825
annotation not available
      
 0.740
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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