STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGM6Transglutaminase 6. (706 aa)    
Predicted Functional Partners:
ENSSSUP00005014060
annotation not available
      
 0.794
ATXN10
Ataxin 10.
      
 0.774
ATN1
Atrophin 1.
      
 0.768
ENSSSUP00005009274
annotation not available
      
 0.749
PPP2R2B
Protein phosphatase 2 regulatory subunit Bbeta.
      
 0.729
ATXN1
Ataxin 1.
      
 0.625
CACNA1A
Calcium voltage-gated channel subunit alpha1 A.
      
 0.613
MLN
Motilin.
     
 0.563
SACS
Sacsin molecular chaperone.
      
 0.534
DDRGK1
DDRGK domain containing 1.
      
 0.533
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.