STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSF4Cleavage and polyadenylation specific factor 4. (302 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specific factor 2.
    
 0.996
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.994
WDR33
WD repeat domain 33.
    
 0.993
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.993
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 0.991
SYMPK
Symplekin.
    
 0.991
CSTF2
Cleavage stimulation factor subunit 2.
   
 0.986
NUDT21
Nudix hydrolase 21.
    
 0.985
WDR82
WD repeat domain 82.
    
 0.981
CSTF1
Cleavage stimulation factor subunit 1.
    
 0.977
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.