STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGSF6Immunoglobulin superfamily member 6. (234 aa)    
Predicted Functional Partners:
CD300LG
CD300 molecule like family member g.
   
  
 0.628
MFSD4B
Major facilitator superfamily domain containing 4B.
      
 0.616
WDR38
WD repeat domain 38.
      
 0.615
KNOP1
Lysine rich nucleolar protein 1.
      
 0.615
FRY
FRY microtubule binding protein.
      
 0.596
CLEC12A
C-type lectin domain family 12 member A.
   
  
 0.557
ENSSSUP00005004247
annotation not available
      
 0.520
CSRNP1
Cysteine and serine rich nuclear protein 1.
      
 0.520
FAM133B
Family with sequence similarity 133 member B.
      
 0.508
ENSSSUP00005029906
annotation not available
      
 0.508
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.