STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORMDL3ORMDL sphingolipid biosynthesis regulator 3. (153 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
    
 0.992
SPTLC3
Serine palmitoyltransferase long chain base subunit 3.
    
 0.979
SPTLC2
Serine palmitoyltransferase long chain base subunit 2.
    
 0.979
ENSSSUP00005017476
annotation not available
    
 0.971
SPTSSB
Serine palmitoyltransferase small subunit B.
     
 0.960
GOLGA7
Golgin A7.
   
 
  0.871
ISM1
Isthmin 1.
    
 0.667
SACM1L
SAC1 like phosphatidylinositide phosphatase.
    
 0.651
ADAM33
ADAM metallopeptidase domain 33.
     
 0.620
ZPBP2
Zona pellucida binding protein 2.
      
 0.620
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.