STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPM1Transient receptor potential cation channel subfamily M member 1. (1634 aa)    
Predicted Functional Partners:
ENSSSUP00005012986
annotation not available
      
 0.962
RGS7
Regulator of G protein signaling 7.
      
 0.846
ELFN1
Extracellular leucine rich repeat and fibronectin type III domain containing 1.
      
 0.842
GNB3
G protein subunit beta 3.
    
 
 0.826
NYX
Nyctalopin.
      
 0.811
GRM6
Glutamate metabotropic receptor 6.
      
 0.803
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
      
 0.776
RHO
Rhodopsin.
      
 0.776
CTBP2
C-terminal binding protein 2.
      
 0.765
MLANA
melan-A.
   
  
 0.665
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.