STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDHGC5Protocadherin gamma subfamily C, 5. (944 aa)    
Predicted Functional Partners:
SH3BP5L
SH3 binding domain protein 5 like.
      
 0.617
CWH43
Cell wall biogenesis 43 C-terminal homolog.
      
 0.536
CLSTN3
Calsyntenin 3.
      
 0.528
MYNN
Myoneurin.
     
 0.526
EMILIN1
Elastin microfibril interfacer 1.
      
 0.521
LRRC34
Leucine rich repeat containing 34.
      
 0.519
GPR87
G protein-coupled receptor 87.
      
 0.519
TELO2
Telomere maintenance 2.
    
 
 0.490
SNCAIP
Synuclein alpha interacting protein.
    
 0.484
RUFY4
RUN and FYVE domain containing 4.
      
 0.477
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.