STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFP1ZFP1 zinc finger protein. (405 aa)    
Predicted Functional Partners:
MEGF6
Multiple EGF like domains 6.
    
 0.649
MAPK1
Mitogen-activated protein kinase 1.
    
 0.590
TCF15
Transcription factor 15.
   
 
 0.533
PUS1
Pseudouridine synthase 1.
      
 0.521
TXLNG
Taxilin gamma.
      
 0.521
NMD3
NMD3 ribosome export adaptor.
      
 0.513
PRSS12
Serine protease 12.
      
 0.478
TRIM28
Tripartite motif containing 28.
    
  0.478
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.
     
 0.408
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.