STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARRDC5Arrestin domain containing 5. (321 aa)    
Predicted Functional Partners:
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 
 0.813
VPS26C
VPS26 endosomal protein sorting factor C.
      
 0.784
TXNIP
Thioredoxin interacting protein.
      
 0.750
WWP2
WW domain containing E3 ubiquitin protein ligase 2.
    
 
 0.726
NDFIP2
Nedd4 family interacting protein 2.
      
 0.617
ENSSSUP00005026105
annotation not available
      
 0.604
TSG101
Tumor susceptibility 101.
    
 
 0.536
NDFIP1
Nedd4 family interacting protein 1.
      
 0.525
ENSSSUP00005026015
annotation not available
      
 0.520
TXN2
Thioredoxin 2.
    
 0.496
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.