STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR41WD repeat domain 41. (315 aa)    
Predicted Functional Partners:
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.989
SMCR8
SMCR8-C9orf72 complex subunit.
    
 0.989
RB1CC1
RB1 inducible coiled-coil 1.
    
 0.912
ENSSSUP00005010735
annotation not available
    
 0.907
ENSSSUP00005027181
annotation not available
 
      0.899
ATG13
Autophagy related 13.
     
 0.895
RAB39B
RAB39B, member RAS oncogene family.
     
 0.883
FZR1
Fizzy and cell division cycle 20 related 1.
   
 0.870
CDC20
Cell division cycle 20.
   
 0.870
CDC20B
Cell division cycle 20B.
   
 0.870
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.