STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRATD2LRAT domain containing 2. (313 aa)    
Predicted Functional Partners:
DOP1B
DOP1 leucine zipper like protein B.
      
 0.760
VWA5B2
Von Willebrand factor A domain containing 5B2.
      
 0.747
LRWD1
Leucine rich repeats and WD repeat domain containing 1.
      
 0.674
TICRR
TOPBP1 interacting checkpoint and replication regulator.
      
 0.621
DOP1A
DOP1 leucine zipper like protein A.
      
 0.619
PLAAT1
Phospholipase A and acyltransferase 1.
      
 0.616
ENSSSUP00005027576
annotation not available
      
 0.615
ENSSSUP00005027596
annotation not available
      
 0.615
PTPN20
Protein tyrosine phosphatase non-receptor type 20.
      
 0.614
FAM81A
Family with sequence similarity 81 member A.
      
 0.613
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.