STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMEPA1Prostate transmembrane protein, androgen induced 1. (253 aa)    
Predicted Functional Partners:
SMAD2
SMAD family member 2.
    
 0.949
SMAD3
SMAD family member 3.
    
 0.858
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 
 0.703
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
    0.684
NHP2
NHP2 ribonucleoprotein.
   
 0.682
TRMT11
tRNA methyltransferase 11 homolog.
   
 0.672
TSR1
TSR1 ribosome maturation factor.
   
  0.671
RPF2
Ribosome production factor 2 homolog.
   
    0.664
PRMT5
Protein arginine methyltransferase 5.
   
 0.656
BYSL
Bystin like.
   
 0.654
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.