STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBED4Zinc finger BED-type containing 4. (1148 aa)    
Predicted Functional Partners:
FAM193A
Family with sequence similarity 193 member A.
      
 0.618
THYN1
Thymocyte nuclear protein 1.
      
 0.470
EWSR1
EWS RNA binding protein 1.
      
 0.469
ENSSSUP00005014828
annotation not available
      
 0.469
HIVEP3
HIVEP zinc finger 3.
    
 
 0.461
ZNF132
Zinc finger protein 132.
    
 
 0.461
ENSSSUP00005013401
annotation not available
      
 0.459
ENSSSUP00005020617
annotation not available
      
 0.459
BRD1
Bromodomain containing 1.
   
  
 0.442
FEM1C
Fem-1 homolog C.
    
 0.407
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.