STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAFAH2Platelet activating factor acetylhydrolase 2. (417 aa)    
Predicted Functional Partners:
PAFAH1B2
Platelet activating factor acetylhydrolase 1b catalytic subunit 2.
     
 0.950
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
     
 0.946
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
     
 0.943
LPCAT2
Lysophosphatidylcholine acyltransferase 2.
     
 0.943
PAFAH1B3
Platelet activating factor acetylhydrolase 1b catalytic subunit 3.
     
 0.943
PLA2G12A
Phospholipase A2 group XIIA.
     
 0.916
PLA2G7
Phospholipase A2 group VII.
  
  
 
0.915
LPCAT4
Lysophosphatidylcholine acyltransferase 4.
     
 0.913
CHPT1
Choline phosphotransferase 1.
     
 0.912
CEPT1
Choline/ethanolamine phosphotransferase 1.
     
 0.911
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.