STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXB2Homeobox B2. (400 aa)    
Predicted Functional Partners:
HOXB5
Homeobox B5.
   
 
0.792
HOXB7
Homeobox B7.
   
 
0.676
HOXB3
Homeobox B3.
   
  
0.658
HOXB6
Homeobox B6.
   
 
0.629
HOXB8
Homeobox B8.
   
 
0.538
ENSSSUP00005018310
annotation not available
    
 0.536
HOXB4
Homeobox B4.
   
 
0.478
ENSSSUP00005014905
annotation not available
      
 0.477
SMIM15
Small integral membrane protein 15.
      
 0.477
OLIG3
Oligodendrocyte transcription factor 3.
      
 0.461
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.