STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC13A5Solute carrier family 13 member 5. (731 aa)    
Predicted Functional Partners:
ABCC6
ATP binding cassette subfamily C member 6.
   
 
 0.667
DEPDC7
DEP domain containing 7.
      
 0.623
SLC38A11
Solute carrier family 38 member 11.
   
  
 0.530
SLC25A1
Solute carrier family 25 member 1.
      
 0.530
SLC5A11
Solute carrier family 5 member 11.
  
  
 0.528
SLC23A1
Solute carrier family 23 member 1.
   
  
 0.527
SLC7A4
Solute carrier family 7 member 4.
     
 0.524
TSPAN5
Tetraspanin 5.
      
 0.520
FIBIN
Fin bud initiation factor homolog.
      
 0.519
SLC36A2
Solute carrier family 36 member 2.
      
 0.519
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.