STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLASRPCLK4 associating serine/arginine rich protein. (655 aa)    
Predicted Functional Partners:
CCNL2
Cyclin L2.
   
  
 0.818
GABPB2
GA binding protein transcription factor subunit beta 2.
     
 0.810
CIRBP
Cold inducible RNA binding protein.
      
 0.772
MRPL51
Mitochondrial ribosomal protein L51.
      
 0.526
GEMIN7
Gem nuclear organelle associated protein 7.
      
 0.526
TRAPPC6A
Trafficking protein particle complex 6A.
      
 0.526
CLPTM1
CLPTM1 regulator of GABA type A receptor forward trafficking.
      
 0.519
BCL2L2-PABPN1
BCL2L2-PABPN1 readthrough.
      
 0.519
EXOSC9
Exosome component 9.
      
 0.511
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
   
    0.511
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.