STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSUP00005030373annotation not available (143 aa)    
Predicted Functional Partners:
SNRNP25
Small nuclear ribonucleoprotein U11/U12 subunit 25.
     
 0.953
ZMAT5
Zinc finger matrin-type 5.
    
 0.952
RNPC3
RNA binding region (RNP1, RRM) containing 3.
    
 0.950
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
    
 0.939
SNRNP48
Small nuclear ribonucleoprotein U11/U12 subunit 48.
    
 0.934
PHF5A
PHD finger protein 5A.
    
 0.896
SF3B2
Splicing factor 3b subunit 2.
    
 0.894
SF3B6
Splicing factor 3b subunit 6.
    
  0.894
SF3B4
Splicing factor 3b subunit 4.
    
 0.866
ENSSSUP00005024237
annotation not available
    
 0.857
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.