STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMYD2SET and MYND domain containing 2. (397 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
   
 0.980
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.874
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
  0.863
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
  0.863
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
  0.863
DOT1L
DOT1 like histone lysine methyltransferase.
    
 0.755
KMT5A
Lysine methyltransferase 5A.
    
 0.735
ASH1L
ASH1 like histone lysine methyltransferase.
     
 0.727
NSD1
Nuclear receptor binding SET domain protein 1.
     
 0.726
SETD2
SET domain containing 2, histone lysine methyltransferase.
     
 0.726
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.